PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY92263.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 159aa    MW: 18705.5 Da    PI: 9.8864
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY92263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.51.7e-13947240
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                 i +k  r+ tf kR +g+ KKA+ELS+LC++++ ++i 
  TEY92263.1  9 EIPDKDGRNATFLKRTKGLKKKANELSILCGVDIGLVIH 47
                5778999*****************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MRSKIKHEEI PDKDGRNATF LKRTKGLKKK ANELSILCGV DIGLVIHKKE QSNAVLWPSP  60
ESFWSRLQEF MEFRNEERKR RMTTHEGLMK QMVQGEMENL EKLKKAIQLK ESRQLVMKSM  120
QTDSFNGFGI DQLNAMNSFA DHMIKKLQQR DNELNEDEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
178104RKRRMTTHEGLMKQMVQGEMENLEKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31640.11e-20M-type_MADS family protein