PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY92250.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 706aa MW: 77153.6 Da PI: 6.9249

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY92250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.2	1.8e-24	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF+ + +++ l TEY92250.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLLAGDSIVFM--RAENGDL 215 89**************************996555555..89*******************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY92250.1 216 CVGIRRA 222 **997 PP
2	Auxin_resp	110.4	1.8e-36	276	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++ +FevvY+Pra+t+eF+vk++ v+ a+++++++GmRfkmafetedss++++ +Gt+++v+ +dp+ Wp+S+Wr+L+ TEY92250.1 276 AASLAASGHPFEVVYYPRAGTPEFCVKASLVKVAMQIRWCLGMRFKMAFETEDSSRISWfMGTISSVQVVDPIWWPDSPWRLLQ 359 678999****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MISFMESKEK MRETERCLDS QLWHACAGSM VQMPLKNSKV FYFPQGHSEH SCGNVDFRNF 60 PRIPAYIPCR VSSISFMADP DTDEVFAKMR LSPTSGSDAT EVDHDEGGAV GSENQETPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT 180 PRRHLLTTGW STFVNHKKLL AGDSIVFMRA ENGDLCVGIR RAKRGVGGGT DTWNLAGGNS 240 IVPYGGFSSS LRDDEKNNNV NWIGRGRVKA EDVVEAASLA ASGHPFEVVY YPRAGTPEFC 300 VKASLVKVAM QIRWCLGMRF KMAFETEDSS RISWFMGTIS SVQVVDPIWW PDSPWRLLQV 360 AWDEPDLLQN VKRVSPWLVE LVSNMPAIHL SPFSPPRKKM RLPQHSDHPF DGQIPMPPIS 420 HQLVGSSNPF GFLPNTTPAG MQGARHAQYG LSLSSLHVNK QLQLGLFPVG FLPHDRYPTG 480 PSSPLLPTTA SNENISCLLT MGNPTQGSAK PDHGKAAPFV LFGKPILPEN QISLSCSSDT 540 VSPTRTGNSS SDGNVEKTGN TSDGSGCGIN QNEVPEHSSC EGIQPDIMET GHCKVFMESE 600 DVGRTLDLSL LGSYEQLYKK LADMFGIGVS EILNRVLCRD AAGRLKPVGD QPFSFFSASG 660 CVIRKFLPSI SSHCLGLLQL ARCAKRVGDT GLVSLPCEAL CGEISC

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MISFMESKEK MRETERCLDS QLWHACAGSM VQMPLKNSKV FYFPQGHSEH SCGNVDFRNF  60
PRIPAYIPCR VSSISFMADP DTDEVFAKMR LSPTSGSDAT EVDHDEGGAV GSENQETPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKLL AGDSIVFMRA ENGDLCVGIR RAKRGVGGGT DTWNLAGGNS  240
IVPYGGFSSS LRDDEKNNNV NWIGRGRVKA EDVVEAASLA ASGHPFEVVY YPRAGTPEFC  300
VKASLVKVAM QIRWCLGMRF KMAFETEDSS RISWFMGTIS SVQVVDPIWW PDSPWRLLQV  360
AWDEPDLLQN VKRVSPWLVE LVSNMPAIHL SPFSPPRKKM RLPQHSDHPF DGQIPMPPIS  420
HQLVGSSNPF GFLPNTTPAG MQGARHAQYG LSLSSLHVNK QLQLGLFPVG FLPHDRYPTG  480
PSSPLLPTTA SNENISCLLT MGNPTQGSAK PDHGKAAPFV LFGKPILPEN QISLSCSSDT  540
VSPTRTGNSS SDGNVEKTGN TSDGSGCGIN QNEVPEHSSC EGIQPDIMET GHCKVFMESE  600
DVGRTLDLSL LGSYEQLYKK LADMFGIGVS EILNRVLCRD AAGRLKPVGD QPFSFFSASG  660
CVIRKFLPSI SSHCLGLLQL ARCAKRVGDT GLVSLPCEAL CGEISC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein