PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY92210.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 390aa    MW: 44060.3 Da    PI: 8.1802
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY92210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.48e-0688112126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +k +lC +f   G+C  G +CkF+H+
  TEY92210.1  88 PKSVLCEHFKL-GQCAKGFKCKFSHD 112
                 6899***8888.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MPPKQSKAEV VKKQKAVEDK TFGLKNKNKS KTVQKYVQSL KQSGQPKPDP SKLQAQKKKE  60
EEKAKEKELA ELFKVAVKQP KVPVGVDPKS VLCEHFKLGQ CAKGFKCKFS HDLNVQRKGE  120
KIDIYSDTRE EEQGTMEDWD QETLEKVVAS KSNEYNNKNK PTDIFLRASA KRIMSRGDGT  180
LAELDVSGVG VEASIMKAKS KGWEGVGAAE VVGEDEAEAL QDVLALGVGV EIKAFGVRRQ  240
PPQESEVEKK QYGWFWVCPN GSKECHYRHA LPPGYVLKSQ MKALLEEEAQ KITIEEEIEN  300
QRAKVSTCTP MTTDLFMQWK MKKVEEREAG LAAQRAERAK NDRMSGRELF LLDASLFVDD  360
AEAYDKYQRE EEPDVEQKVV RCLCPTIRIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.13e-63C3H family protein