PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY91675.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 368aa MW: 42054.2 Da PI: 4.8935

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY91675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.7	2.3e-21	50	133	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++e++aLi +r+e++ ++++k +++lW+ + + mrergf rs+ +C ekw+nl k+y+++k++++ ++ s ++ ++++++ TEY91675.1 50 WCEEETRALISLRKETNFMFSASKFNQHLWDYIHATMRERGFDRSAAMCVEKWRNLLKQYRRVKQNKNH-DADGSDKMNFYNEID 133 **************************************************************99886.578888****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MHQEQEESAA DFNNEDTMIA EMSGEDDPAN QSSFKPLLPP PPPRKRGETW CEEETRALIS 60 LRKETNFMFS ASKFNQHLWD YIHATMRERG FDRSAAMCVE KWRNLLKQYR RVKQNKNHDA 120 DGSDKMNFYN EIDEVMMEGG GNGKDSELGS FVQSVGEKDM DDASLTFGHM EGMCVVQLDL 180 CMSFLRHCTG GSATHMDLEA HPLSITTEAD AVNVSPWNWK DTLPGKGEQR NTYCGRVITV 240 KMGEYTKRIG IDGSGDAIKE TIKSVFGLRT KRPFWLEDED NIVRALDREM PIGNYILHVD 300 EGLMIRVCSP EHLPVHTEEK TFFTDDDFCQ FLSRRCWTCL RENNGYRHID SMDELCPGAV 360 YRGVSSIN

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MHQEQEESAA DFNNEDTMIA EMSGEDDPAN QSSFKPLLPP PPPRKRGETW CEEETRALIS  60
LRKETNFMFS ASKFNQHLWD YIHATMRERG FDRSAAMCVE KWRNLLKQYR RVKQNKNHDA  120
DGSDKMNFYN EIDEVMMEGG GNGKDSELGS FVQSVGEKDM DDASLTFGHM EGMCVVQLDL  180
CMSFLRHCTG GSATHMDLEA HPLSITTEAD AVNVSPWNWK DTLPGKGEQR NTYCGRVITV  240
KMGEYTKRIG IDGSGDAIKE TIKSVFGLRT KRPFWLEDED NIVRALDREM PIGNYILHVD  300
EGLMIRVCSP EHLPVHTEEK TFFTDDDFCQ FLSRRCWTCL RENNGYRHID SMDELCPGAV  360
YRGVSSIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-104	Trihelix family protein