PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY90946.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 295aa    MW: 32587.4 Da    PI: 9.8964
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY90946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA603e-19168201134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  TEY90946.1 168 CSDCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 201
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNLNSPPSHF PMHQIDNDHE QPFVPNHSSS VSCHFFFDPT RDHAGFYDHH QLYQPSHHIA  60
GDQNYRYHGG SAYETKGGSA YETKGADDSS LNLTLWKKES DELQNSSNPM RWMSSKMRVM  120
QKMKKTDHDR AAVVKTTTTA QQPSSSSVET DLSSNSSSYN NNSPIRVCSD CNTTKTPLWR  180
SGPKGPKSLC NACGIRQRKA RRAMAAAANG GSQDPVTKIK LQQKRKNGHA ASQLKKRCKT  240
AVTVAGSGGN GQKRIGFEDF LINLSKNLAF HRVFPEDEKD AAFLLMALSS GLVNG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198239RKARRAMAAAANGGSQDPVTKIKLQQKRKNGHAASQLKKRCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.15e-29GATA family protein