PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY90342.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 475aa    MW: 52881.1 Da    PI: 5.5512
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY90342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS339.84.6e-104984691374
        GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                 l++lL+++Aeav   +    la+ +L rl+el+sp++ ++m+Rlaayft AL+a l    s+  + l +++      +++laa++l++++sP++kf+h+
  TEY90342.1  98 LIHLLTAAAEAVVGPNECrgLARVILVRLKELVSPTDgTNMERLAAYFTDALQALLDA-ASGGKHPLGVEHH----RTDVLAAFQLLQDMSPYVKFGHF 191
                 689*********998777679***********9987769*****************99.5555555544444....699******************** PP

        GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                 taNqaIleav +++rvHi+D+di++G+QW++L+qaLasR++gpp  +lRiT+v+++ +g  s  +++etg+rLa+fA+++g pf+f+    ++ e++++
  TEY90342.1 192 TANQAILEAVTHDRRVHIVDYDIMEGIQWAPLMQALASRKDGPPapHLRITAVSRSGTGrrSFSAVQETGRRLANFAASIGKPFSFHQCRLDADETFRP 290
                 ****************************************776555*********888899999************************999999***** PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvErel 289
                 ++L++ +gEal+Vn++l+l ++ +     ++ + ++L+  ++l+P+++++ve+e+   +++ Fl rf++ l+++sa++dslea++p + ++r+ vEr++
  TEY90342.1 291 SSLKLVRGEALVVNCMLHLPHFTH---RAPDSIASFLSGARTLNPRLITLVEEETAPpSEGGFLGRFMDLLHHFSAIYDSLEAGFPMQWRARALVERVF 386
                 *********************984...44444569*******************99989**************************************** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
                 lg++i+  +a   ++r  ++ +  +W ++++++GF+pv++s  + +qaklll  ++ dgyrvee  s+ lvlgWk r+L+s+S W+
  TEY90342.1 387 LGPRIMGSLARMYRAR--ETGEGCSWGQWMGAVGFHPVNISFANHCQAKLLLGLYN-DGYRVEELtSNKLVLGWKLRRLLSASIWT 469
                 ************9994..3444689******************************9.******876999****************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MSMVMDLGFP SFDYSTTTMT AASADEGCNW NTWSPVVDWK ALSGDQEDFQ NLIDSMMDEN  60
VVLHPIDQLE ETEEEEEYNN LSPEYNMAEA EDSKGVRLIH LLTAAAEAVV GPNECRGLAR  120
VILVRLKELV SPTDGTNMER LAAYFTDALQ ALLDAASGGK HPLGVEHHRT DVLAAFQLLQ  180
DMSPYVKFGH FTANQAILEA VTHDRRVHIV DYDIMEGIQW APLMQALASR KDGPPAPHLR  240
ITAVSRSGTG RRSFSAVQET GRRLANFAAS IGKPFSFHQC RLDADETFRP SSLKLVRGEA  300
LVVNCMLHLP HFTHRAPDSI ASFLSGARTL NPRLITLVEE ETAPPSEGGF LGRFMDLLHH  360
FSAIYDSLEA GFPMQWRARA LVERVFLGPR IMGSLARMYR ARETGEGCSW GQWMGAVGFH  420
PVNISFANHC QAKLLLGLYN DGYRVEELTS NKLVLGWKLR RLLSASIWTS QDCDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-162GRAS family protein