PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90297.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 490aa MW: 54729.1 Da PI: 6.2796

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.1e-07	243	264	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H TEY90297.1 243 FCTICGKGFKRDANLRMHMRGH 264 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MDPDERLCTE TWAKSSSGLD THSNNPSLTD FDRHQKKWEE SSFDRHGVRT SGQQLSGSKR 60 PLACDTDSQM QMNNLQGKQI QEAPNMQNWD PKAMLSNLSF LEKKIHQLQD LVQLVIGRRG 120 QAMSQADEIL AQQQQLITAD LTSIIVQLIS TAGSLLPSVK NSESLSSQLG QFGGMMSQAA 180 GVSDNVVHNN ANKMEDHHDP TGGLEEHTMK SDDETEEGEN LPPGSYEILQ LEKEEILAPH 240 THFCTICGKG FKRDANLRMH MRGHGDEYKT PAALAKPHKE SSSDPVLIKR YSCPYVGCKR 300 NKDHKKFQPL KTILCVKNHY KRTHCDKNYT CSRCHTKKFS VIADLKTHEK HCGRDQWLCS 360 CGTTFSRKDK LFGHIALFQG HTPAIPLEEA GPSDQGQSSV EAANKVEQLD FSYKLDDPGR 420 SVCQGLMEVE GSGEDPATYF SPLGFDTSNM ASYQEFPRHL FEDAESSFSF LLSCDDSPKN 480 GRYAAPNDLE

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MDPDERLCTE TWAKSSSGLD THSNNPSLTD FDRHQKKWEE SSFDRHGVRT SGQQLSGSKR  60
PLACDTDSQM QMNNLQGKQI QEAPNMQNWD PKAMLSNLSF LEKKIHQLQD LVQLVIGRRG  120
QAMSQADEIL AQQQQLITAD LTSIIVQLIS TAGSLLPSVK NSESLSSQLG QFGGMMSQAA  180
GVSDNVVHNN ANKMEDHHDP TGGLEEHTMK SDDETEEGEN LPPGSYEILQ LEKEEILAPH  240
THFCTICGKG FKRDANLRMH MRGHGDEYKT PAALAKPHKE SSSDPVLIKR YSCPYVGCKR  300
NKDHKKFQPL KTILCVKNHY KRTHCDKNYT CSRCHTKKFS VIADLKTHEK HCGRDQWLCS  360
CGTTFSRKDK LFGHIALFQG HTPAIPLEEA GPSDQGQSSV EAANKVEQLD FSYKLDDPGR  420
SVCQGLMEVE GSGEDPATYF SPLGFDTSNM ASYQEFPRHL FEDAESSFSF LLSCDDSPKN  480
GRYAAPNDLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-178	C2H2 family protein