PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY90253.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 128aa    MW: 14242.7 Da    PI: 10.8998
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY90253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.91.2e-172458135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                Cs C+tt TplWR gp g+k+LCnaCG++y kk++
  TEY90253.1 24 CSGCHTTRTPLWRGGPAGPKSLCNACGIKYNKKRR 58
                9*******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MDLKVDKKAD FGEKNGSISP LKSCSGCHTT RTPLWRGGPA GPKSLCNACG IKYNKKRRQL  60
LGLETGKPNK KKKRTSVVRS NEVRENLKMR FKSEIVFQRS GKLLSKLREE ERAAILLMAL  120
SCGSSVYA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15574KKRRQLLGLETGKPNKKKKR
25675KKRRQLLGLETGKPNKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-29GATA family protein