PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90133.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 812aa MW: 90242.9 Da PI: 6.6249

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.8	1e-23	187	288	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + + +el+ TEY90133.1 187 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyKEQ-RPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEAGELR 282 99**************************86333.45679********************************************..449999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ TEY90133.1 283 LGIRRA 288 ***996 PP
2	Auxin_resp	105.7	5.3e-35	313	394	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+s+++ F+v+Y+Pra +++F+v+ve+++ +++k+ vG+Rf+m+f +ds+err+sG+v+gv d+dp+rW+nSkWr+L TEY90133.1 313 VANAISSNTSFHVFYSPRARHADFIVPVEEYVMCTTSKLPVGTRFRMKFHFDDSPERRFSGVVTGVGDMDPYRWQNSKWRCL 394 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 812 aa Download sequence
MEYDLNHAVS EVEQNIACVN GGECEGGSCD YGRLQTSVSS PNGASHSSSS SPCSESAPPS 60 IYVDLWHACA GPLTSLPKKG NVVVYFPQGH MEQAASASPF PPMDMPTFDL LPQIFCRVID 120 VRLLVSALSS FWFVSNALLA NKENDEVYTQ LNLLPLPEMG GVKLDGKENE SADENGVMPA 180 KLTSHMFCKT LTASDTSTHG GFSVPRRAAE DCFPPLDYKE QRPSQELIAK DLHGVEWKFR 240 HIYRGQPRRH LLTTGWSIFV SQKNLVSGDA VLFLRGEAGE LRLGIRRAAR PRNGLPDSII 300 KNQGSYPNVL SPVANAISSN TSFHVFYSPR ARHADFIVPV EEYVMCTTSK LPVGTRFRMK 360 FHFDDSPERR FSGVVTGVGD MDPYRWQNSK WRCLMVRWDE DIMSNHQERV SPWDIDFSGN 420 YAPLSIQPSP RTKKLRSNLH VTLHGSSIAG GGAVLDFEES VRSSKVLQGQ ENVGLVSPFY 480 RGDRVNCQLD FGMQPSTPNP VANRMDKINY GEFVRNHAPA NFTGFLESNW FPKVLQGQEI 540 CSFKSLAGRS SSDIGVWSKP QHGYNIHNQR LTPSFYPLAS EGSRSIPIHH KNIHTGGLIL 600 SNFSNFQTEK HVLSPTSILS GTKADVGRMP HLTNEPRVLE RTSVLKHMNN ESNLKEEVPS 660 CKIFGFSLTE DPAAINLQGP NKRSCTRHSC SLVHKEGSLV GRAIDISRLN SYEDLLTELE 720 RLFNMEGLLR DSIYGWRILY TDSENDMMVI GDDPWHEVVE VVTKIHIYAQ EEVEKLTVGM 780 NSDDTKSCLE EAPPAPDVSK SSSVGSPILP LL

Sequence ? help Back to Top

Protein Sequence Length: 812 aa Download sequence

MEYDLNHAVS EVEQNIACVN GGECEGGSCD YGRLQTSVSS PNGASHSSSS SPCSESAPPS  60
IYVDLWHACA GPLTSLPKKG NVVVYFPQGH MEQAASASPF PPMDMPTFDL LPQIFCRVID  120
VRLLVSALSS FWFVSNALLA NKENDEVYTQ LNLLPLPEMG GVKLDGKENE SADENGVMPA  180
KLTSHMFCKT LTASDTSTHG GFSVPRRAAE DCFPPLDYKE QRPSQELIAK DLHGVEWKFR  240
HIYRGQPRRH LLTTGWSIFV SQKNLVSGDA VLFLRGEAGE LRLGIRRAAR PRNGLPDSII  300
KNQGSYPNVL SPVANAISSN TSFHVFYSPR ARHADFIVPV EEYVMCTTSK LPVGTRFRMK  360
FHFDDSPERR FSGVVTGVGD MDPYRWQNSK WRCLMVRWDE DIMSNHQERV SPWDIDFSGN  420
YAPLSIQPSP RTKKLRSNLH VTLHGSSIAG GGAVLDFEES VRSSKVLQGQ ENVGLVSPFY  480
RGDRVNCQLD FGMQPSTPNP VANRMDKINY GEFVRNHAPA NFTGFLESNW FPKVLQGQEI  540
CSFKSLAGRS SSDIGVWSKP QHGYNIHNQR LTPSFYPLAS EGSRSIPIHH KNIHTGGLIL  600
SNFSNFQTEK HVLSPTSILS GTKADVGRMP HLTNEPRVLE RTSVLKHMNN ESNLKEEVPS  660
CKIFGFSLTE DPAAINLQGP NKRSCTRHSC SLVHKEGSLV GRAIDISRLN SYEDLLTELE  720
RLFNMEGLLR DSIYGWRILY TDSENDMMVI GDDPWHEVVE VVTKIHIYAQ EEVEKLTVGM  780
NSDDTKSCLE EAPPAPDVSK SSSVGSPILP LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein