PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY90129.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 183aa    MW: 20134.6 Da    PI: 4.9093
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY90129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601352.9e-42261261101
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+C ++Cvlapyfp ++p kf  +h++FGasn++k+l+++pe +reda+ss+vyeA+ar+r+PvyG++g i++lq+q++ l+++la++++
  TEY90129.1  26 PCAACKILRRRCIEKCVLAPYFPPHDPLKFSTAHRVFGASNIIKFLQEVPEGQREDAVSSMVYEANARLREPVYGCAGAIWQLQKQVNDLHQQLAKAQA 124
                 7***********************************************************************************************999 PP

      DUF260 100 el 101
                 +l
  TEY90129.1 125 QL 126
                 85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MEGSDDISAS SPSSSSSPQS AVVLSPCAAC KILRRRCIEK CVLAPYFPPH DPLKFSTAHR  60
VFGASNIIKF LQEVPEGQRE DAVSSMVYEA NARLREPVYG CAGAIWQLQK QVNDLHQQLA  120
KAQAQLLNMQ SQNANLMAII CMDMSSQDYT NQHNLATYII GSTTTSFSDD DDLGFSSEQP  180
LWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-56LBD family protein