PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89938.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 619aa    MW: 69929.8 Da    PI: 6.3105
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.22.3e-1122486151374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av++ d + ++ lLa++++++sp+gd ++Rla+yf++AL+ar+a+    +    ++   ++ + +  l  ++++ +++P+ k+s+l+aN
  TEY89938.1 248 LRTLLMQCAQAVATFDSRTINDLLAKIRQHSSPHGDGTERLAHYFANALQARVAG----TG---SAALFHRISAAVMLRGYQTYIKACPFKKMSNLLAN 339
                 6789***************************************************....33...333344444789999******************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I + +++++++HiiDf+i +G+QWp+L+q+L++R++gpp+lRiTg++ p++g   +e++  tg+rLa++++++gvpf++++ +a+r+e++++eeL++
  TEY89938.1 340 KTIRKLADSATTLHIIDFGILYGFQWPCLIQSLSERRGGPPKLRITGIDFPQPGfrPAERVADTGDRLARYCKRFGVPFQYTA-IAQRWESIKVEELNI 437
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E l+Vn+ ++l++++de+v  +s+rd+vLkl+k+++P++++    +  +n++ F++rf eal  ys++fd++ea++pre+ +r   E+e++g +++
  TEY89938.1 438 ERDELLVVNCLYRLQNVPDETVVANSPRDQVLKLIKRINPNMFIQGAVNGTYNTPFFVTRFREALFQYSSMFDMYEATVPREDPNRLLFEEEVFGTDVT 536
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n++aceg+er +  et+++W++r  +aGF+++pl++++++ +++ ++  + + ++v+e+ +++++gWk+r L ++S+W+
  TEY89938.1 537 NIIACEGTERLNWPETYKQWQARTATAGFRQLPLDQQIVTYVRSKVKAEYHKDFSVDEDGKWMLQGWKGRVLHAFSCWK 615
                 ***********************************************999888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    
MNSTLVQGYL APANDFQPNC RSRAVFPEEN RVLGLRVGSS FDESQSESVE SQNEGSCSSS  60
PEGEISKEMD HSDAILKYIG IMLMEEEDLE NKPCMLHDCL ALQATEKSLY DVLNNNDSSN  120
QTDTTASGSS SDITSFLESN WAENIRDFES SLSPSETQYQ NLAPRDKKHR YREDNSGDYR  180
SNKQLANNVG GEPEALDMYD KVLLCSISDD ALVSDCEAKT KWQPKGATRG RPKGGKKQQG  240
VIKEVVDLRT LLMQCAQAVA TFDSRTINDL LAKIRQHSSP HGDGTERLAH YFANALQARV  300
AGTGSAALFH RISAAVMLRG YQTYIKACPF KKMSNLLANK TIRKLADSAT TLHIIDFGIL  360
YGFQWPCLIQ SLSERRGGPP KLRITGIDFP QPGFRPAERV ADTGDRLARY CKRFGVPFQY  420
TAIAQRWESI KVEELNIERD ELLVVNCLYR LQNVPDETVV ANSPRDQVLK LIKRINPNMF  480
IQGAVNGTYN TPFFVTRFRE ALFQYSSMFD MYEATVPRED PNRLLFEEEV FGTDVTNIIA  540
CEGTERLNWP ETYKQWQART ATAGFRQLPL DQQIVTYVRS KVKAEYHKDF SVDEDGKWML  600
QGWKGRVLHA FSCWKPAHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-168GRAS family protein