PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY89803.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 122aa MW: 13392.3 Da PI: 8.1987 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 107.6 | 1e-33 | 8 | 93 | 15 | 100 |
DUF260 15 dCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +Cv+apyfp ++p+kf vhk+FGasnv+kll++l+ +reda++sl+yeAe r+rdPvyG+vg+i+ lqq+l+q++++l+ +k+e TEY89803.1 8 ECVFAPYFPPDNPQKFTTVHKVFGASNVSKLLNELSAAQREDAVNSLAYEAEYRLRDPVYGCVGLISVLQQRLRQVQVDLENAKKE 93 8********************************************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MIKNIHVECV FAPYFPPDNP QKFTTVHKVF GASNVSKLLN ELSAAQREDA VNSLAYEAEY 60 RLRDPVYGCV GLISVLQQRL RQVQVDLENA KKELYTYIGP SAAAAICRAA GGCCSGARRN 120 DA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 4e-46 | LBD family protein |