PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89426.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 833aa MW: 92735.6 Da PI: 6.4254

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62	9.5e-20	172	285	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..............EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliy............rkksgryvltkGWkeFvkangLkegDfv 80 f+k+lt sd++++g +++p++ ae+ + + ++l+ +d++ +W++++i+ ++++r++lt+GW+ Fv+a++L +gD++ TEY89426.1 172 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQT--PPAQELMARDLHDVEWKFRHIFrevsielaerhdIRQPKRHLLTTGWSVFVSAKRLVAGDSI 268 99***************************7444..44459***********999***9998888999****************** PP EEEE-SSSEE..EEEEE-S CS B3 81 vFkldgrsefelvvkvfrk 99 +F ++++ +l+++++r+ TEY89426.1 269 LFI--WNEKNQLLLGIRRA 285 ..8899999***997 PP
2	Auxin_resp	117.9	8.2e-39	310	393	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+v+YnPras+seFv++++k+ ka++ +++svGmRf+m fete+ss rr++Gt++g+ dldpvrW nS+Wrs+k TEY89426.1 310 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYAKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGIVDLDPVRWANSHWRSVK 393 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 833 aa Download sequence
MGSLGFEGKG NINKSLDFGE VWIKKHEAFN IRVGSAGSRR IPLIYLVQLV LVVETFVASR 60 EKKFLDSELW HACAGPLVSL PTVGARVVYF PQGHSEQVSA TTSKEVDAHI PNYPSLSPQL 120 ICQLHNVTMH ADVETDEVYA KMTLQPLTPQ EQKDTCLPVE LGIPSRQPTN YFCKTLTASD 180 TSTHGGFSVP RRAAEKVFPP LDFSQTPPAQ ELMARDLHDV EWKFRHIFRE VSIELAERHD 240 IRQPKRHLLT TGWSVFVSAK RLVAGDSILF IWNEKNQLLL GIRRATRPQT VMPSSVLSSD 300 SMHIGLLAAA AHAAATNSCF TVFYNPRASP SEFVIPLSKY AKAVYHTRIS VGMRFRMLFE 360 TEESSVRRYM GTITGIVDLD PVRWANSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP 420 MYPSLFPLRL KRPWYPGVSS YQDAGSEAIN GMPWLRGEAG EVGFNSINFQ SVGMLPWMQQ 480 RYDPTASRHD LNQQYQAIMA AGQFQQQPVA YLQHSGSHNP QTQQHHIIQP SSVPLQTQML 540 SDNMQKLTPQ QADNQSKEHH QTYPEAYLVR HPLDIPSPSF TKPEFSNSAA PMAPPCVQNM 600 LGSLCPEGSS GNLLNLSGAG QATLDEHSPQ HSWVAKYTGK DASLEQENCS LDVQNHSLFG 660 ASIDSGLLLP TTVSRVVTSS VPADIFPMGL GSSGFQSSVY DYVQDSSDLL HNTGQVDQAA 720 PGGTYVKVYK TGSVGRSVDI GRFSSYEELR QELGQMFGVE GLVEDPQRSG WQLVFVDREN 780 DILLLGDDPW EAFVNNVWYI KILSPQDVVK LGKQEGESLN ASSVERDAHS LHY

Sequence ? help Back to Top

Protein Sequence Length: 833 aa Download sequence

MGSLGFEGKG NINKSLDFGE VWIKKHEAFN IRVGSAGSRR IPLIYLVQLV LVVETFVASR  60
EKKFLDSELW HACAGPLVSL PTVGARVVYF PQGHSEQVSA TTSKEVDAHI PNYPSLSPQL  120
ICQLHNVTMH ADVETDEVYA KMTLQPLTPQ EQKDTCLPVE LGIPSRQPTN YFCKTLTASD  180
TSTHGGFSVP RRAAEKVFPP LDFSQTPPAQ ELMARDLHDV EWKFRHIFRE VSIELAERHD  240
IRQPKRHLLT TGWSVFVSAK RLVAGDSILF IWNEKNQLLL GIRRATRPQT VMPSSVLSSD  300
SMHIGLLAAA AHAAATNSCF TVFYNPRASP SEFVIPLSKY AKAVYHTRIS VGMRFRMLFE  360
TEESSVRRYM GTITGIVDLD PVRWANSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP  420
MYPSLFPLRL KRPWYPGVSS YQDAGSEAIN GMPWLRGEAG EVGFNSINFQ SVGMLPWMQQ  480
RYDPTASRHD LNQQYQAIMA AGQFQQQPVA YLQHSGSHNP QTQQHHIIQP SSVPLQTQML  540
SDNMQKLTPQ QADNQSKEHH QTYPEAYLVR HPLDIPSPSF TKPEFSNSAA PMAPPCVQNM  600
LGSLCPEGSS GNLLNLSGAG QATLDEHSPQ HSWVAKYTGK DASLEQENCS LDVQNHSLFG  660
ASIDSGLLLP TTVSRVVTSS VPADIFPMGL GSSGFQSSVY DYVQDSSDLL HNTGQVDQAA  720
PGGTYVKVYK TGSVGRSVDI GRFSSYEELR QELGQMFGVE GLVEDPQRSG WQLVFVDREN  780
DILLLGDDPW EAFVNNVWYI KILSPQDVVK LGKQEGESLN ASSVERDAHS LHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein