PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY89337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 203aa MW: 23729.9 Da PI: 8.3169 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 54 | 106 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eql Le+ F +++++ +e++ +LA++lgL+ rqV vWFqNrRa++k TEY89337.1 54 KRKLSEEQLSMLERSFGSEHKLETERKDRLAAELGLDPRQVAVWFQNRRARWK 106 45899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 116.8 | 1.2e-37 | 53 | 143 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kr+ls+eq+++LE+sF +e+kLe+erK +la eLgl+prqvavWFqnrRAR+k k+lE+++ L+++y++ + e++rL++ev +++e+l+ TEY89337.1 53 RKRKLSEEQLSMLERSFGSEHKLETERKDRLAAELGLDPRQVAVWFQNRRARWKIKKLEEEFFNLRSNYESTVVEKCRLQTEVLKIKEQLS 143 8**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MSHEFSDMFD YCSVGIITQF VPKQGEVKSV KPRRRPRKGK GGEGEAEGGA MIRKRKLSEE 60 QLSMLERSFG SEHKLETERK DRLAAELGLD PRQVAVWFQN RRARWKIKKL EEEFFNLRSN 120 YESTVVEKCR LQTEVLKIKE QLSGAEKEIQ RLSEHWERVR ANSPTSSLSE FGIECLDNVF 180 CVPDTVTNYA HAFQWDDRFY YIA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 37 | KPRRRPR |
2 | 33 | 38 | RRRPRK |
3 | 34 | 40 | RRPRKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18550.1 | 8e-50 | HD-ZIP family protein |