PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY89324.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | GATA | ||||||||
Protein Properties | Length: 210aa MW: 22964.5 Da PI: 8.2965 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.8 | 2e-20 | 99 | 133 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++ TEY89324.1 99 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 133 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MYHTHHQSGN SYPMLFSMSN PHRPFDEPDL YSPSASVDCT LSLGTPSTRV DHTTHHDKNR 60 SSCISNFGWN ILPSKHTPPS SSAKPHRPSA GDPLLARRCA NCDTTSTPLW RNGPRGPKSL 120 CNACGIRYKK EERRATAAAA TGNGNGAQVE AQYMMKAPCY ASGYGGEYRF MEDEGAAVDH 180 SEMGGGGGVP FMSWRFNVTD RPGLVHDFTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 1e-51 | GATA family protein |