PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY88675.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 308aa    MW: 34710.3 Da    PI: 7.306
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY88675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.21.4e-083757526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                +C+f+++ G+C yG+rC++ H+
  TEY88675.1 37 ICSFYQK-GICTYGSRCRYEHV 57
                7******.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MSKGYALLFS RLNMLSHIYS WEHCEFAHDW KAPSNNICSF YQKGICTYGS RCRYEHVKVC  60
RSSSDSPLPI ELPYGGAVST AASSPPPALG HDDMLSDDNH VICSFSGHGD CPRGEDCPHI  120
HGDLCPICDK RCLHPFRPQE REEHLKSCEK RRKHMEALRC SQEIECSVCL EAVLSKPTSA  180
ERKFGILSEC DHSFCISCIR NWRSSSSTSG IHLNSAVRAC PLCRRLSYFV IPSVVWYSSS  240
EEKQEIVQSY KTKLRSIDCK HFDFGNGTCP FGTSCFYRHA FHDGRLEEVV VRHVGGDDGD  300
AVVAKDMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-120C3H family protein