PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY88013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | GATA | ||||||||
Protein Properties | Length: 115aa MW: 12921.1 Da PI: 10.8484 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.4 | 8.5e-18 | 21 | 55 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+tt TplWR gp g+k+LCnaCG++y kk++ TEY88013.1 21 CTDCRTTRTPLWRGGPHGPKSLCNACGIKYNKKRR 55 ********************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
MDLKQQISEE KKIRSSSPKS CTDCRTTRTP LWRGGPHGPK SLCNACGIKY NKKRRESLGL 60 DTGSRKKKRS EDRSSKVGEI LKMRFMRSSK LMSKLREEEQ AAILLMALSC GSVSA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 52 | 69 | KKRRESLGLDTGSRKKKR |
2 | 53 | 70 | KKRRESLGLDTGSRKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 9e-26 | GATA family protein |