PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY88000.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 189aa MW: 21540.7 Da PI: 4.1434

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY88000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	119.1	5.4e-37	1	147	158	308
GRAS 158 leetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256 +e+tg+rL++fA+++++pf f+v++ +++++++ + ++++p+E++aV + l+l ++ +++ sle v+k++ +++P v+vv+e ea+hns+sF +r TEY88000.1 1 MEKTGSRLQSFAQSMNLPFLFEVVYLQEMDAFSEDLFSIEPDETVAVYSFLMLRSMISKPKSLET----VMKVLARIRPAVMVVSEVEANHNSPSFIDR 95 589****************************************************88888888....************************** PP GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrer 308 f+eal +ysa fd+le+ + r +e r+ +E ++g+ i+n+v +er+++ TEY88000.1 96 FMEALLFYSAYFDCLEECMERGNEYRAILEGCFFGEGIMNIVGEGDEEREAE 147 *****************************************999998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MEKTGSRLQS FAQSMNLPFL FEVVYLQEMD AFSEDLFSIE PDETVAVYSF LMLRSMISKP 60 KSLETVMKVL ARIRPAVMVV SEVEANHNSP SFIDRFMEAL LFYSAYFDCL EECMERGNEY 120 RAILEGCFFG EGIMNIVGEG DEEREAECLE EVFNEFGKGR CCDLEFDGKG LIVGWKGTPI 180 QSVTAWKFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66350.1	6e-24	GRAS family protein