PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87999.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 186aa MW: 20168.9 Da PI: 5.2061

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	73.1	5.1e-23	50	179	2	134
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPilkfshlt 97 + Ll++A+ v +++ +a +lLar + ++s +g+p+qRla yf AL+++++r++ ++ ++++t+ + ++ +al + f l f+h++ TEY87999.1 50 MHSLLSAADNVGMKQFDEAARLLARCQMMVSVSGTPVQRLACYFSAALEQKISRECGMVV---TTRKTD-GGVHHVGHALGTgnaFLASYQQLPFGHVM 144 689*************************************************443333...333332.33444444444444499998888888887 PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLas 134 qaI e v g +vH iD++i G+QW a +q L++ TEY87999.1 145 --QAIIEQVRGGGKVHLIDLQIRSGIQWTAVMQGLSD 179 ..9****************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MDESAFMDLF SSVFGQESAS CDAVQKMNMV GVEPGRSEGF SDDERDVEIM HSLLSAADNV 60 GMKQFDEAAR LLARCQMMVS VSGTPVQRLA CYFSAALEQK ISRECGMVVT TRKTDGGVHH 120 VGHALGTGNA FLASYQQLPF GHVMQAIIEQ VRGGGKVHLI DLQIRSGIQW TAVMQGLSDS 180 QVHVSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50420.1	4e-12	GRAS family protein