PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY87964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 132aa MW: 14801.1 Da PI: 9.3999 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 146.1 | 9.8e-46 | 14 | 114 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfa+vhk+FGasn+ k+l++l+e +r da++s+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++ TEY87964.1 14 PCAACKLLRRRCAQDCVFAPYFPADDPHKFACVHKVFGASNINKMLQELEERKRGDAVRSMVYEAKARVRDPVYGCVGAISSLQQQIDDLQTQLALTQA 112 7***********************************************************************************************999 PP DUF260 100 el 101 +l TEY87964.1 113 QL 114 85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MKDISKRRGS AASPCAACKL LRRRCAQDCV FAPYFPADDP HKFACVHKVF GASNINKMLQ 60 ELEERKRGDA VRSMVYEAKA RVRDPVYGCV GAISSLQQQI DDLQTQLALT QAQLVHMRMH 120 AHNNVTQPLA FN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 5e-51 | LBD family protein |