PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87918.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 377aa MW: 42808.7 Da PI: 5.2523

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	79.9	3.6e-25	59	141	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e+ aLi +r+e++ ++++k++k+lW+ +s kmre+gf rsp++C++kw+nl k+ykk k+++ + +++ ++ +++++e TEY87918.1 59 WAQEETSALISLRKEIDFLFNTSKSNKHLWDNISMKMREKGFDRSPTMCTDKWRNLLKEYKKSKQNNPDT-NGNC-KMNFYKDIE 141 ********************************************************************94.5554.799999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MFSEKEESAI DFYNSKHGSP NENKMIIQIS DGGGEDPSIA ANQNPPPPSP APKKRAETWA 60 QEETSALISL RKEIDFLFNT SKSNKHLWDN ISMKMREKGF DRSPTMCTDK WRNLLKEYKK 120 SKQNNPDTNG NCKMNFYKDI EEIMRDRSKN GNCWKNSATS SDAAGSKVES FMQFADKGID 180 DASLTFGPVE GNGRSALNLE TRLDHEPHPL AISTADAVVA SGVSPWNWRE TPTENGEDRN 240 TFDGRVITVK LGDYTKRIGI DGTGDAIKEA IKSAFRLRTK RAFWLEDEDN VVRSLDREMP 300 LGNYTLHVDE GLTIKVCLFD GPEHLPVHTE EKTFYTEDDF RQFLSRRCWT CLREYDGYRN 360 IDSMDELCPG ALYRGVN

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MFSEKEESAI DFYNSKHGSP NENKMIIQIS DGGGEDPSIA ANQNPPPPSP APKKRAETWA  60
QEETSALISL RKEIDFLFNT SKSNKHLWDN ISMKMREKGF DRSPTMCTDK WRNLLKEYKK  120
SKQNNPDTNG NCKMNFYKDI EEIMRDRSKN GNCWKNSATS SDAAGSKVES FMQFADKGID  180
DASLTFGPVE GNGRSALNLE TRLDHEPHPL AISTADAVVA SGVSPWNWRE TPTENGEDRN  240
TFDGRVITVK LGDYTKRIGI DGTGDAIKEA IKSAFRLRTK RAFWLEDEDN VVRSLDREMP  300
LGNYTLHVDE GLTIKVCLFD GPEHLPVHTE EKTFYTEDDF RQFLSRRCWT CLREYDGYRN  360
IDSMDELCPG ALYRGVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G25990.1	1e-154	Trihelix family protein