PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY87619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 236aa MW: 25361 Da PI: 7.6788 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 84.7 | 1.3e-26 | 4 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeer.edamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +C++C+vlr++C++ C+l+p++ p++q++++ +++k++G++ +l+ll+a+p+ r ++++sl+yeA+ r+ +P++G+vg+++++++ +++++e TEY87619.1 4 SCNGCRVLRKGCSEYCTLRPCLhwlnsPQSQSNATLFLAKFYGRAGLLNLLAAAPPLSRpAEIFKSLLYEACGRIINPIHGSVGLMSSGEWPRCHAAVE 102 6*****************************************************999974789********************************9999 PP DUF260 94 lallke 99 ++l ++ TEY87619.1 103 AVLGGA 108 887655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGLSCNGCRV LRKGCSEYCT LRPCLHWLNS PQSQSNATLF LAKFYGRAGL LNLLAAAPPL 60 SRPAEIFKSL LYEACGRIIN PIHGSVGLMS SGEWPRCHAA VEAVLGGAQL ISPLHGCDIR 120 HVSKGSAPRA GSRCHRRRSA SLADSATAAQ CVSEAEAKFT ITGWDDSKEL VIGEKFRRGP 180 SHDSFSVETV DPSLLLFNKG TIPETGLSEV GLELSLGMNP LLQTYFTTVI DISDSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68510.1 | 2e-44 | LBD family protein |