PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87129.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 136aa    MW: 15972.6 Da    PI: 10.0452
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.17.6e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss
  TEY87129.1  9 KRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MVRGKVEMKR IENPTSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSS  60
NMQKSIEKYL ERAREEQGNE VEQRMKLQYL KHEAALMMKK IELLENSQRL PFLSSFTSCK  120
KLLPSNKYYM DETGSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.48e-49MIKC_MADS family protein