PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY86984.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Whirly
Protein Properties Length: 279aa    MW: 31214.2 Da    PI: 9.9361
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY86984.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly209.82.9e-651002371138
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 
                 svyk+kaal+v++++p+f+ l+sg++kl+++G +ll++a+a ++r+ydW++kq+f+ls+te++++++l++++sceffhdp +++s+eG+vrk+lkvePl
  TEY86984.1 100 SVYKGKAALTVEPRAPEFSPLESGAFKLSKEGYILLQFAPASGVRQYDWSRKQVFSLSVTEIGHIISLGARGSCEFFHDPNKGKSDEGRVRKVLKVEPL 198
                 79************************************************************************************************* PP

      Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138
                 pdGsG+f+nlsv+n++++++e++++P++kaef+vl s +
  TEY86984.1 199 PDGSGHFFNLSVQNKITNVDENIYIPITKAEFTVLVSSF 237
                 ***********************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MVIHSLFPPR GGVAISTQQP QKLSAFNFAI PTNFVSTRKS SSLFRSPLRY RSKNATFCVK  60
NQYSTPQEQS HQQQKFSPYD SPSQSQPGGQ FPPRVYVGYS VYKGKAALTV EPRAPEFSPL  120
ESGAFKLSKE GYILLQFAPA SGVRQYDWSR KQVFSLSVTE IGHIISLGAR GSCEFFHDPN  180
KGKSDEGRVR KVLKVEPLPD GSGHFFNLSV QNKITNVDEN IYIPITKAEF TVLVSSFNFV  240
LPYLLGWHTF ANSIKPEDAN CQNSSNATNP RSADFEWTR