PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY86211.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 688aa MW: 76984.7 Da PI: 8.7836

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY86211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.4e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++C++ F ++ n++rHir+H TEY86211.1 77 RCKKCSREFCSPINYRRHIRVH 98 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MPAAKLCSSG TLNAMKSEVR NDSLDTFIRQ AIGKEPLLPF PRTVDSSVPW IQLFQALDQP 60 DLPGWPLLTP AKVQMQRCKK CSREFCSPIN YRRHIRVHRR SLNINKECHK SRDLLAVFWD 120 KLSLEQTKEL VSFNDIILKD IPGSSVVKAL ASSLRRPGVW TLPQAYVKAG ATLLDIIQAK 180 PSRLPISSQE LFSILDDASE NTFLCAGTAE SVQKYVFDGE TDKNSLELKN LVALTSFLFE 240 QQLVKAWVAD KDAEALRCQK LLVEEEEAEQ KRQVVILERK KQKKLRQKQQ KIKEQYYGCS 300 RDLDVYVDAV DRPTLAEASD LSSPSDPNSN SKEVPTTSDS VQPQNKEPDE DIGAQFDARS 360 EHKIHGDSPA VELQMVVANG LRHVATNCLQ ALKSQRGSRY GPHANLNLRT LNPELMHKFG 420 PSKDRSLHNG NKVWTKKLKT NNDGENPRSP LQEVSSHHIE QNNGEVIIGS ISVTLKSYFD 480 QQQASHPNER QDTCGTEHAV LKKKTASEKP AKSNSLQSGT NRVATRLWRP VSRGESKNVP 540 PVSRSNADPD DNATLSKVHD HTSSSERSGQ SQSLDSDGCH NGKQSHVVSV ENAQPGLVPF 600 SIEAAKEFFA RRWKDAISGD HVKLVLSSEH KHHGCSDIQH ASDPPRSNAP NHDENQFSRT 660 VQVAIKPEKS VKFKYIPKQK LSRSCEEW

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MPAAKLCSSG TLNAMKSEVR NDSLDTFIRQ AIGKEPLLPF PRTVDSSVPW IQLFQALDQP  60
DLPGWPLLTP AKVQMQRCKK CSREFCSPIN YRRHIRVHRR SLNINKECHK SRDLLAVFWD  120
KLSLEQTKEL VSFNDIILKD IPGSSVVKAL ASSLRRPGVW TLPQAYVKAG ATLLDIIQAK  180
PSRLPISSQE LFSILDDASE NTFLCAGTAE SVQKYVFDGE TDKNSLELKN LVALTSFLFE  240
QQLVKAWVAD KDAEALRCQK LLVEEEEAEQ KRQVVILERK KQKKLRQKQQ KIKEQYYGCS  300
RDLDVYVDAV DRPTLAEASD LSSPSDPNSN SKEVPTTSDS VQPQNKEPDE DIGAQFDARS  360
EHKIHGDSPA VELQMVVANG LRHVATNCLQ ALKSQRGSRY GPHANLNLRT LNPELMHKFG  420
PSKDRSLHNG NKVWTKKLKT NNDGENPRSP LQEVSSHHIE QNNGEVIIGS ISVTLKSYFD  480
QQQASHPNER QDTCGTEHAV LKKKTASEKP AKSNSLQSGT NRVATRLWRP VSRGESKNVP  540
PVSRSNADPD DNATLSKVHD HTSSSERSGQ SQSLDSDGCH NGKQSHVVSV ENAQPGLVPF  600
SIEAAKEFFA RRWKDAISGD HVKLVLSSEH KHHGCSDIQH ASDPPRSNAP NHDENQFSRT  660
VQVAIKPEKS VKFKYIPKQK LSRSCEEW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	278	285	ERKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-115	C2H2 family protein