PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY86022.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GATA

Protein Properties

Length: 542aa MW: 60391.9 Da PI: 6.9137

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY86022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.9	4.3e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ TEY86022.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MGKHGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDELEDL 60 RLPRVKTISI KNKELKVLKR KHSIEVAEFV EVPPDHYQGL QKVYDEDTSN RSSSGSAISN 120 SEKYAQYGIA DTSDLTSPPQ PTAWDSIVPS RKRTCVARPK PSPVEVLTKD LYTLWYEQQS 180 SCLSGSSEED LLLESDKPMI SVEIGHGSVL IRHPSSFIRE EESEASSLSV DNKQYTLTSR 240 DMSFRGRVED TGAYSSSKVN EKLKKNAYPG VVQEHMRRDK DQVVKLPILA HNNSPLCYIN 300 LQDIVNFELF STHLTNDEQK QLMSLLPSVD ASDAPYSQKS LKSMFDSAEF NLNLSSFQKL 360 IAEGVFDNSY GGFNTDDCRI LKKLVLCDLA KSKWVEQHTA FKDLKRKNTI NSEVTGGYNG 420 FEIVNAAHLE LSREGQHKKT TGSKVMMKSP RRILMKSSYG KKEILDRDES FVSAKSLFSI 480 QNDNGSSVLD TSHFEGENSD QDLLLDVPSN GSFPQAELLP SSSFGAMAST SSSSAYPKLI 540 HP

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MGKHGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDELEDL  60
RLPRVKTISI KNKELKVLKR KHSIEVAEFV EVPPDHYQGL QKVYDEDTSN RSSSGSAISN  120
SEKYAQYGIA DTSDLTSPPQ PTAWDSIVPS RKRTCVARPK PSPVEVLTKD LYTLWYEQQS  180
SCLSGSSEED LLLESDKPMI SVEIGHGSVL IRHPSSFIRE EESEASSLSV DNKQYTLTSR  240
DMSFRGRVED TGAYSSSKVN EKLKKNAYPG VVQEHMRRDK DQVVKLPILA HNNSPLCYIN  300
LQDIVNFELF STHLTNDEQK QLMSLLPSVD ASDAPYSQKS LKSMFDSAEF NLNLSSFQKL  360
IAEGVFDNSY GGFNTDDCRI LKKLVLCDLA KSKWVEQHTA FKDLKRKNTI NSEVTGGYNG  420
FEIVNAAHLE LSREGQHKKT TGSKVMMKSP RRILMKSSYG KKEILDRDES FVSAKSLFSI  480
QNDNGSSVLD TSHFEGENSD QDLLLDVPSN GSFPQAELLP SSSFGAMAST SSSSAYPKLI  540
HP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-121	GATA family protein