PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY85535.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 246aa    MW: 27869.6 Da    PI: 9.5014
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY85535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.11.5e-101048240
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                 ie++  r  t  kR++g++KK + L +LCd+ +++i  
  TEY85535.1 10 MIEEEKSRILTMKKRKKGLIKKLHQLTTLCDVPACMIFH 48
                69999*******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRGKLKMEM IEEEKSRILT MKKRKKGLIK KLHQLTTLCD VPACMIFHDP TTNSTSVWLE  60
EDPDQVRSLI EAYKAKKNDP SGGVREYLLS NFFDQRQRQA EEELEKLRKN NVEGMFPTWD  120
DHLNFMDEAQ LRELAATVRG KAENHNQQRR RERKHCGEGG GASSKAAMAD REALIGARSQ  180
SRRNGAKAPW MPPEKETKKT TSGENTAGKE LNPRHNRMII DHCCKGSHAG DGQKMAGPVE  240
REEATA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.16e-09M-type_MADS family protein