PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY85088.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 439aa    MW: 48565.5 Da    PI: 6.0525
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY85088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.91.6e-92484362373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL++cA+a++++d++laq++L+ l+++a pdgd+ qRl+  f++AL +r ar  s+ +k l+  + s  n++ ++  l  f++++P+++f++ +aN 
  TEY85088.1  48 EQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSGQRLTCGFLRALISRAAR--SGSCKLLSDVAVSIPNHKFSIIELAGFVDLTPWHRFGFTAANA 144
                 79****************************************************..56666666666666668888888888***************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl...vakrledlelee 193
                 a++eaveg + vHi+D+++++++Q p+L++++++Rpegpp l++T+ g+ e +      ++e +g +L +fA++ +v +ef+v+    ++ +++l +++
  TEY85088.1 145 AVMEAVEGRSVVHIVDLSLTHCMQIPTLIDSFSTRPEGPPFLKLTVAGATEDFppmLDLSYEDLGAKLINFARSRNVAMEFRVVpssSSDGFSSL-IDH 242
                 *************************************************888898888999**********************966433344444.677 PP

        GRAS 194 Lrvkp.....gEalaVnlvlqlhrll...........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                 L++       gEal+Vn+++ lh+++           ++  s +s+r+ +Lk+v++l+P  v +v+++ad +se++++r+ +a +y +  +d++e+ lp
  TEY85088.1 243 LKITGagdnnGEALIVNCQMLLHYIPdsetlgascvaNHVNSHHSPRSMFLKAVRGLNPCTVLLVDEDADFTSENLVTRLRSAYNYLWIPYDTVETFLP 341
                 7776566667****************999999999976666667799**************************************************** PP

        GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 res++r+++E+  + ++i+nvva+eg  r+er e ++kW +r++ aGF+ v +se+a++++k++l +++  g+ ++ e++ lvl+Wk++++v+++aW
  TEY85088.1 342 RESRQRQWYEAD-MCWKIENVVAQEGPLRVERLEPKGKWVQRMRGAGFRGVGFSEEAVAEVKSMLDEHA-AGWGMKREEQDLVLTWKGHNVVFATAW 436
                 ************.9*******************************************************.8899999999***************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MMQFSESFPP LPPPLPHQII PNKAARRWPG LPSPKLQGSS FGDANCMEQL LVHCANAIET  60
NDATLAQQIL WVLNNIAPPD GDSGQRLTCG FLRALISRAA RSGSCKLLSD VAVSIPNHKF  120
SIIELAGFVD LTPWHRFGFT AANAAVMEAV EGRSVVHIVD LSLTHCMQIP TLIDSFSTRP  180
EGPPFLKLTV AGATEDFPPM LDLSYEDLGA KLINFARSRN VAMEFRVVPS SSSDGFSSLI  240
DHLKITGAGD NNGEALIVNC QMLLHYIPDS ETLGASCVAN HVNSHHSPRS MFLKAVRGLN  300
PCTVLLVDED ADFTSENLVT RLRSAYNYLW IPYDTVETFL PRESRQRQWY EADMCWKIEN  360
VVAQEGPLRV ERLEPKGKWV QRMRGAGFRG VGFSEEAVAE VKSMLDEHAA GWGMKREEQD  420
LVLTWKGHNV VFATAWLPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-170GRAS family protein