PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY84987.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 550aa    MW: 60975.5 Da    PI: 5.3524
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY84987.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.11.4e-1231695501374
        GRAS   1 lvelLlecAeavssgdle..........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                 l++lL++cAe vs+ d+           +a+a+++ l++++s +g+p qRl ay++e+L+arl++s+s +yk+l+++e +   sse ++++ +++++ P
  TEY84987.1 169 LKQLLIACAEIVSEADTIsmsdrqvaisAAEAMMEILEKNVSVSGEPAQRLGAYMLEGLRARLLSSGSIIYKKLKCKEPT---SSELMSYMGVLYQIVP 264
                 5799******99996653333344666699*************************************************9...99999*********** PP

        GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                 ++kf+++  N  I  a+e+e+r+HiiDf+i qG QW++L+qaL+ Rp+gpp +RiTgv++++s   +   le +g++La++A+++gvpfefn  +a + 
  TEY84987.1 265 YYKFAYMSSNVIIGGAMENENRIHIIDFQIAQGSQWMSLIQALSRRPGGPPYIRITGVDDSDSAhaRGGGLELVGQKLAQLAQSCGVPFEFNC-AAMSG 362
                 ************************************************************8887889999***********************.8999* PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                  +++le+L+v++gEalaVn+ + lh+++desvs++++rd++L+l+kslsPk++++veqe+++n+++F +rf+e+l+yy+a+f+s++a+ pr++++ri+ 
  TEY84987.1 363 CQVQLEHLKVRHGEALAVNFPYILHHMPDESVSTTNHRDRLLRLIKSLSPKIMTLVEQESNTNTSTFTQRFIETLDYYTAMFESIDAGRPRDDRQRINT 461
                 *************************************************************************************************** PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
                 E++++++++vn++aceg er+erhe ++kWr+rl +aGF++++ls ++ ++++ +lr+++s+ yr  e  +g+l+lgWk+r+L ++SaWr
  TEY84987.1 462 EEHCVAKDVVNIIACEGIERVERHEVFGKWRMRLAMAGFSQLRLSPSVSNSVRDMLREYSSN-YRSAELgDGALYLGWKNRALATASAWR 550
                 ************************************************************88.888876588999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MQTSQTSASL QSFYNQPMQQ NDSYGSSTFQ VLNNDSTGSR SQGNEVSSQT YPDQFFTLES  60
TPAIDYATYS SPSAISVSSS RSPFSPQGSL SYASDIYQPS DNTYGSPLSG CSGVDDENKL  120
LHALWVLRNE LLGPESDTDD SGTFNGLVSQ PSTFTRYNKI LEMAPHMDLK QLLIACAEIV  180
SEADTISMSD RQVAISAAEA MMEILEKNVS VSGEPAQRLG AYMLEGLRAR LLSSGSIIYK  240
KLKCKEPTSS ELMSYMGVLY QIVPYYKFAY MSSNVIIGGA MENENRIHII DFQIAQGSQW  300
MSLIQALSRR PGGPPYIRIT GVDDSDSAHA RGGGLELVGQ KLAQLAQSCG VPFEFNCAAM  360
SGCQVQLEHL KVRHGEALAV NFPYILHHMP DESVSTTNHR DRLLRLIKSL SPKIMTLVEQ  420
ESNTNTSTFT QRFIETLDYY TAMFESIDAG RPRDDRQRIN TEEHCVAKDV VNIIACEGIE  480
RVERHEVFGK WRMRLAMAGF SQLRLSPSVS NSVRDMLREY SSNYRSAELG DGALYLGWKN  540
RALATASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein