PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY84499.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 423aa MW: 46908.2 Da PI: 5.0431

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY84499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	31.2	4.6e-10	18	60	4	40
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 r C+ + +k+++++C+ ++ +lC++C ++ H+ H++v TEY84499.1 18 RACDSCIRKRATWYCTADDAFLCQSCDSTVHSAnplarrHERV 60 68*****************************667888888876 PP
2	CCT	67.6	3.3e-23	367	410	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a TEY84499.1 367 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 410 9*****************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MVSSDKKMAN IVGGKSIRAC DSCIRKRATW YCTADDAFLC QSCDSTVHSA NPLARRHERV 60 RLKTVSSSVK PIDRGLRISV PSWHQGFTRK ARTPRKGKNA KCGPADGRSL SSDRTHNHLV 120 PEISSEENSH DEEQLLYRVP IFDPSVAELC ISVNSNEAVV GNPNDGEITP GSAPGFNGFL 180 PSELDLAEFA ADVESLLGKG LDEEAFDIEG LGILDDERES CLGSEKVKVE HDEEIDHLNI 240 DGEYIGVGRE TFELNFDYDS PINGEDEEMD TKEISMEQIF GSNFEDSSKV FDRGDDDAKK 300 IFLSLNYEGI MSAWDEEKSP WTTGERPEVN PNDWLSDFAG TCGAVHVYGD IGVMGGQQAG 360 AGGDGGREAR VSRYREKRRT RLFSKKIRYE VRKLNAEKRP RMKGRFVKRA NFVASAALAL 420 INK

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MVSSDKKMAN IVGGKSIRAC DSCIRKRATW YCTADDAFLC QSCDSTVHSA NPLARRHERV  60
RLKTVSSSVK PIDRGLRISV PSWHQGFTRK ARTPRKGKNA KCGPADGRSL SSDRTHNHLV  120
PEISSEENSH DEEQLLYRVP IFDPSVAELC ISVNSNEAVV GNPNDGEITP GSAPGFNGFL  180
PSELDLAEFA ADVESLLGKG LDEEAFDIEG LGILDDERES CLGSEKVKVE HDEEIDHLNI  240
DGEYIGVGRE TFELNFDYDS PINGEDEEMD TKEISMEQIF GSNFEDSSKV FDRGDDDAKK  300
IFLSLNYEGI MSAWDEEKSP WTTGERPEVN PNDWLSDFAG TCGAVHVYGD IGVMGGQQAG  360
AGGDGGREAR VSRYREKRRT RLFSKKIRYE VRKLNAEKRP RMKGRFVKRA NFVASAALAL  420
INK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	378	394	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	6e-96	CO-like family protein