PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY84456.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 271aa MW: 31130.5 Da PI: 5.0249

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY84456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	110.8	9.5e-35	10	111	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal..peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 aCaaCk++rr+C+++C lap fpa++pk f+nvh+lFG++n+++llk+l +++++ +am+s+ y+A +r + Pv G++ i++l+ q++++++el+++ TEY84456.1 10 ACAACKYQRRRCTPECLLAPFFPADEPKMFQNVHRLFGVKNIQNLLKELgpDHTQKAIAMKSIKYHAAMRDKYPVWGCMFEIHQLTYQIQHAEEELQAV 108 7**********************************************744445899************************************998 PP DUF260 98 kee 100 ++ TEY84456.1 109 LHQ 111 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MTIKSGSGQA CAACKYQRRR CTPECLLAPF FPADEPKMFQ NVHRLFGVKN IQNLLKELGP 60 DHTQKAIAMK SIKYHAAMRD KYPVWGCMFE IHQLTYQIQH AEEELQAVLH QLAFYRQQQQ 120 QHENQLSSHT ADDYISDLQL GMGPPGNSLE AHSHYNNNEE AAVADYNINY MDFKEMNNVV 180 NSMCGYSNNN SNENNTNSIL THAHLVMQQQ PISAVEHEDY NEMQPFFDNI DDSQSYIGSK 240 EVYDQSSLSL ESAFKESRHD VEEINENELK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	1e-42	LBD family protein