PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY83620.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 1166aa MW: 130162 Da PI: 6.3236

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY83620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.2	4.9e-21	161	286	1	99
EEEE-..-HHHHTT-EE--HHH.HTT...............................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHH CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...............................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeF 68 f+k+lt sd++++g +++p++ ae++ + +++ ++lt +d++ ++W++++iyr++++r++lt+GW+ F TEY83620.1 161 FCKTLTASDTSTHGGFSVPRRAAEKIfpplvslitidaainlfdlnltrdsflqdfsM-QPPA-QELTAKDLHDQTWTFRHIYRGQPKRHLLTTGWSVF 257 99*****************************************9999999999954.4444.48***************************** PP HHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 69 vkangLkegDfvvFkldgrsefelvvkvfrk 99 v++++L +gD v+F ++++ +l+++++r+ TEY83620.1 258 VSSKRLVTGDAVLFI--RDEKSQLLLGIRRA 286 *************..45677789999997 PP
2	Auxin_resp	125	5.1e-41	311	393	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPrastseFv++++k++ka++++vs+GmRf+m+fete+s rr++Gtv+g+sdldpvrW+nS+Wr+L+ TEY83620.1 311 AAHAAANNSPFTIFYNPRASTSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGMSDLDPVRWKNSQWRNLQ 393 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1166 aa Download sequence
MVSFLNVGGG QVEVEWDFGI VLNLGEKKVT NSELWHACAG PLVSLPPVGS LVVYFPQGHS 60 EQVAASMQKE ADGIPSYPNL PSKLICMLHN VTLHIAFLFC RSIELCCLRV GSFVTLLQCA 120 DAETDEVYAQ MTLLPVTKYD QEALLVSDIG LKHNRQPTEF FCKTLTASDT STHGGFSVPR 180 RAAEKIFPPL VSLITIDAAI NLFDLNLTRD SFLQDFSMQP PAQELTAKDL HDQTWTFRHI 240 YRGQPKRHLL TTGWSVFVSS KRLVTGDAVL FIRDEKSQLL LGIRRANRQQ PALSSSVISS 300 DSMHIGILAA AAHAAANNSP FTIFYNPRAS TSEFVIPLAK YNKAMYTQVS LGMRFRMMFE 360 TEESGVRRYM GTVTGMSDLD PVRWKNSQWR NLQVGWDEST AGERPSRVSI WDIEPVVTPF 420 YICPPPFYRP KLARHPGFPD DSDVENMFKR GMPWLADDFG LKDASSSIFP GLSLVQWMNM 480 QQNNQLSANQ PGLYPNMVTS GALQGNLGSD DPSKLLNFRS PGVAAQNLQM SKGNHQHQQA 540 NQMLQSNAPW SQQQMLQSPT PAQQPQQPQQ PLPMQQMQSQ MLQPTQQQQL LQQTQQHQQS 600 QSMLMPPAMS SMSSEQQAAS RNLQQTAAYS QLQHQHQHQQ QHDVSSSRTT FPVTSLTQDL 660 PFQPHVEQPS TLLQRSQEQQ QMQFQQGTLH GIQQNLSQRP VMQQTPTQQN LSDQQLQMQF 720 LQKLQQQQQQ QQQQMSGALN PMMEPQMPQK QQVQQSQQTQ HLSAPMQQQS NGNCFSASTL 780 LQSPQFQTNQ FHIQQKTPPI ARQQSSHTDG DAPSCSTSPS KINTLGLQPS FAKSQTGQPG 840 MLDNTIVHPS NLAQESHNKL DPRIKHESAN SKAPEQQPKF KINAADHMDA TSSATSYCLD 900 AGALQQSFPL TGLDGDVKSH ARNGLPFAAA MDGLAPDALL SRGFDSDKDI QNLLSNYSGT 960 PRDIETDLSS GINSQSFGVP NMSFKPGSSN DAALNETGVM NGGLWPNQAQ RMRTYTKVQK 1020 RGSVGRTIDV NRYKGYDELR NDLARMFGIE GLLEDPQRTE WKLVYVDHEN DILLVGDDPW 1080 EEFVSCVQSI KILSAAEVQQ MSLDGDLAQL PVANQACSGT DSGNVWRAHY DDNSATSFNR 1140 GDDDWCKFEV FSVRVEERFE TYRLVN

Sequence ? help Back to Top

Protein Sequence Length: 1166 aa Download sequence

MVSFLNVGGG QVEVEWDFGI VLNLGEKKVT NSELWHACAG PLVSLPPVGS LVVYFPQGHS  60
EQVAASMQKE ADGIPSYPNL PSKLICMLHN VTLHIAFLFC RSIELCCLRV GSFVTLLQCA  120
DAETDEVYAQ MTLLPVTKYD QEALLVSDIG LKHNRQPTEF FCKTLTASDT STHGGFSVPR  180
RAAEKIFPPL VSLITIDAAI NLFDLNLTRD SFLQDFSMQP PAQELTAKDL HDQTWTFRHI  240
YRGQPKRHLL TTGWSVFVSS KRLVTGDAVL FIRDEKSQLL LGIRRANRQQ PALSSSVISS  300
DSMHIGILAA AAHAAANNSP FTIFYNPRAS TSEFVIPLAK YNKAMYTQVS LGMRFRMMFE  360
TEESGVRRYM GTVTGMSDLD PVRWKNSQWR NLQVGWDEST AGERPSRVSI WDIEPVVTPF  420
YICPPPFYRP KLARHPGFPD DSDVENMFKR GMPWLADDFG LKDASSSIFP GLSLVQWMNM  480
QQNNQLSANQ PGLYPNMVTS GALQGNLGSD DPSKLLNFRS PGVAAQNLQM SKGNHQHQQA  540
NQMLQSNAPW SQQQMLQSPT PAQQPQQPQQ PLPMQQMQSQ MLQPTQQQQL LQQTQQHQQS  600
QSMLMPPAMS SMSSEQQAAS RNLQQTAAYS QLQHQHQHQQ QHDVSSSRTT FPVTSLTQDL  660
PFQPHVEQPS TLLQRSQEQQ QMQFQQGTLH GIQQNLSQRP VMQQTPTQQN LSDQQLQMQF  720
LQKLQQQQQQ QQQQMSGALN PMMEPQMPQK QQVQQSQQTQ HLSAPMQQQS NGNCFSASTL  780
LQSPQFQTNQ FHIQQKTPPI ARQQSSHTDG DAPSCSTSPS KINTLGLQPS FAKSQTGQPG  840
MLDNTIVHPS NLAQESHNKL DPRIKHESAN SKAPEQQPKF KINAADHMDA TSSATSYCLD  900
AGALQQSFPL TGLDGDVKSH ARNGLPFAAA MDGLAPDALL SRGFDSDKDI QNLLSNYSGT  960
PRDIETDLSS GINSQSFGVP NMSFKPGSSN DAALNETGVM NGGLWPNQAQ RMRTYTKVQK  1020
RGSVGRTIDV NRYKGYDELR NDLARMFGIE GLLEDPQRTE WKLVYVDHEN DILLVGDDPW  1080
EEFVSCVQSI KILSAAEVQQ MSLDGDLAQL PVANQACSGT DSGNVWRAHY DDNSATSFNR  1140
GDDDWCKFEV FSVRVEERFE TYRLVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein