PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY83308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | GATA | ||||||||
Protein Properties | Length: 239aa MW: 26401.5 Da PI: 6.2445 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.5 | 7.5e-18 | 168 | 202 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C++ kTp+WR gp g+ktLCnaCG++y++ +l TEY83308.1 168 CLHCQSDKTPQWRAGPMGPKTLCNACGVRYKSGRL 202 99*****************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MEILDAAEAC FEVSDDLLDF TLGGETEEEV YDLKTSHSSS SSITTAFGDD SLLSGSFPEF 60 AEEELEWLSN KDEFPAVETC FGILSDNPEL LVNHHSPSSV LENSSSSDGN GSASASCCGS 120 LKVPVRPRTN GRRRRPRPSY GELPDQAMWL GQLTWLLPRT GARLGRRCLH CQSDKTPQWR 180 AGPMGPKTLC NACGVRYKSG RLLPEYRPAN SPTFSSKLHS NSHRRVVEMR RKTQFATTV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 2e-39 | GATA family protein |