PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY82242.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 151aa MW: 16807.9 Da PI: 8.6131 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 149.2 | 1.1e-46 | 14 | 113 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpae+p+kfa vhk+FGasnv k+l++lpe++reda+sslvyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++ TEY82242.1 14 PCAACKLLRRRCAEDCVFAPYFPAEEPHKFASVHKVFGASNVNKMLQDLPEHQREDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQA 112 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY82242.1 113 E 113 6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 151 aa Download sequence |
MKDSNSRKQG AASPCAACKL LRRRCAEDCV FAPYFPAEEP HKFASVHKVF GASNVNKMLQ 60 DLPEHQREDA VSSLVYEANA RVRDPVYGCV GAISSLQQQI DALQTQLALA QAEAVHMRMR 120 HYSSSAECAS PSTRGRRSHN HHPKSSESFW H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G31320.1 | 5e-60 | LBD family protein |