PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY82178.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 272aa MW: 30582 Da PI: 9.3662

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY82178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.2	7.9e-17	39	123	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v L+ea++ +++ +r+klk+++Weev+k++ ++ g ++s+k qCk+k+e+++kry+ + + + + s++p++ +l+ TEY82178.1 39 EWSEGAVSSLLEAYEAKWTLRNRAKLKGQDWEEVAKHVsARAGASKSAKtltQCKNKIESMKKRYRSESAAAADA-----SSWPLYPRLD 123 5***********************************855666666643339************999984.....57**9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MERDHQTPNQ NPPPSLLSPN QNPNTSSPRN VSDRLKRDEW SEGAVSSLLE AYEAKWTLRN 60 RAKLKGQDWE EVAKHVSARA GASKSAKTLT QCKNKIESMK KRYRSESAAA ADASSWPLYP 120 RLDLLLRGNN GVAADPPPAA EFPSAQNSNG ADRDRVGKEE EGGGNNEESE KKAIDERESS 180 TAAIDEGKLK RKEKWRKRER EGSWEIGESI RWVAEVVVRA EESRMETMRE IERMRAEAEA 240 KRGELELKRT EIIANTQLQI AKLFARGSTS IQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	199	RKEKWRKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	3e-47	Trihelix family protein