PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY81483.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C3H

Protein Properties

Length: 469aa MW: 51784.3 Da PI: 7.8647

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY81483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	27.6	4.9e-09	108	128	4	25
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+++ + G C+yGd+CkF H TEY81483.1 108 KICNYWVQ-GSCRYGDTCKFLH 128 68****.*********** PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MDVDGGRRIF NRLRPSSSTD HRNNNTRQQK VCFHWEKGNC SRNPCPFLHP TAANGKRGHQ 60 GFGAEDIYRG GSGGLRRTGN YNFNSNSSWG RPQPAIGSRN FVRKVEKKIC NYWVQGSCRY 120 GDTCKFLHQW STDSFTLLTT LEGHKQAVTG ITLPSGSDKL YSGSEDETVR VWDCQSGQLS 180 GVVNLGCSVG CMLSEGPWVF VGLTNLVKCS PQYKQLRPHL SVLQFYLCHS PDCWFQTILS 240 KPHDPGPAWN VQTSMELSLS GPVGQVYSII VGNDLLFAGN KDGTILAWKF NAATNCFEPA 300 ASLKGHTLAV VTLVVGGNRM YSGSMDHTIR VWSLETLQCV QTLTGHNHVV TSVLCWDQFL 360 LSASLDNTAK VWATTESGNL EVTYTHTEEQ GLITLCGMHD SESKPVLFCS CNDNSVRVYD 420 LPSFSERGMI FSKEEVRSIQ IGPGGLFFTG DGSGQVRVWK WSSESTTTS

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MDVDGGRRIF NRLRPSSSTD HRNNNTRQQK VCFHWEKGNC SRNPCPFLHP TAANGKRGHQ  60
GFGAEDIYRG GSGGLRRTGN YNFNSNSSWG RPQPAIGSRN FVRKVEKKIC NYWVQGSCRY  120
GDTCKFLHQW STDSFTLLTT LEGHKQAVTG ITLPSGSDKL YSGSEDETVR VWDCQSGQLS  180
GVVNLGCSVG CMLSEGPWVF VGLTNLVKCS PQYKQLRPHL SVLQFYLCHS PDCWFQTILS  240
KPHDPGPAWN VQTSMELSLS GPVGQVYSII VGNDLLFAGN KDGTILAWKF NAATNCFEPA  300
ASLKGHTLAV VTLVVGGNRM YSGSMDHTIR VWSLETLQCV QTLTGHNHVV TSVLCWDQFL  360
LSASLDNTAK VWATTESGNL EVTYTHTEEQ GLITLCGMHD SESKPVLFCS CNDNSVRVYD  420
LPSFSERGMI FSKEEVRSIQ IGPGGLFFTG DGSGQVRVWK WSSESTTTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51980.1	0.0	C3H family protein