PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY80753.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 462aa    MW: 50474 Da    PI: 5.9014
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY80753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.11.6e-23108210199
                 EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                 f k+lt+sd+++ g +++p+ +a ++          ++ +  tl+ +d++ + W +++iyr++++r++lt+GW++Fv+a++L +gD+vvF+  +r s+ 
  TEY80753.1 108 FAKILTRSDANNGGGFSVPRFCA-DIilppldfdADPPVQ--TLVTRDTHDNAWGFRHIYRGTPRRHLLTTGWSKFVNAKRLVAGDSVVFM--KRkSTD 201
                 89*****************7666.666*****95444444..8999*********************************************..455999 PP

                 ..EEEEE-S CS
          B3  91 elvvkvfrk 99 
                 el+v+++r+
  TEY80753.1 202 ELFVGIRRA 210
                 9******97 PP
2Auxin_resp77.43.7e-26228310283
  Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 +++a  +  FevvY+P++++++Fvv +ekv++al++++s+Gm+++ma++++d+s+  + +G v++v+   +  W++S+Wr+L+
  TEY80753.1 228 IESAVRGLRFEVVYYPKVGSPDFVVAAEKVNEALRIPWSAGMKVRMAVDSDDASRLAWiQGGVTAVTIPMTGIWRKSPWRMLQ 310
                 566778899***********************************************************99***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MTSPPTAAAE IDSSIWHAIA GAGVHVPTVN SAVYYFPQGH LEQCSAAANH NFTHTCPWIP  60
CQVISVRYLC DSVSDQVFSR ILLQPLYQFD SLPTGGGSAA ADDEILSFAK ILTRSDANNG  120
GGFSVPRFCA DIILPPLDFD ADPPVQTLVT RDTHDNAWGF RHIYRGTPRR HLLTTGWSKF  180
VNAKRLVAGD SVVFMKRKST DELFVGIRRA ERFGGDEKSE AAEAISAIES AVRGLRFEVV  240
YYPKVGSPDF VVAAEKVNEA LRIPWSAGMK VRMAVDSDDA SRLAWIQGGV TAVTIPMTGI  300
WRKSPWRMLQ VNWDDPEGSH ANVSPWEVEY LPLSPLIDPG FHPAKRLRFL PDPGILATDS  360
SLLHQYPPAG MQGARRNHMT ADVVQPPTDV PQPLNDIPQP PTKEPDEEVI SISTVLTIGR  420
SSSDIVSPVS QNGVQAATSF QLFGRKIATS TEERDAIAAH TD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-111ARF family protein