PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY80271.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 379aa MW: 43112.8 Da PI: 4.3125

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY80271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.5	4.9e-15	151	232	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+l+L++a ++ + +r++l++ W+ev++k+ ++er+ +qC+++++ l+k+ykk+k ++ s s+++y+++++ TEY80271.1 151 WTEHETLVLLDAWGDRFLKHGRKSLRGEEWQEVAEKVsLGSKIERTDTQCRNRLDTLKKKYKKEKMKFGD----SGSEWVYYKKID 232 ***********************************778899******************99998....3557***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MDDENDVPYR SNTYATNVQK FPVENACYPR DIGNSYGEDD DNTDDGEEDE EEKAVNGVDD 60 DDDDDDDDDD DDDGGNGVQR ISNNDYEYGD EDDNNDDENG DGDQQRHPKK RKLKNLISSY 120 EFAPRMPAPP PLAPPAAPKP SYGGRNPLTD WTEHETLVLL DAWGDRFLKH GRKSLRGEEW 180 QEVAEKVSLG SKIERTDTQC RNRLDTLKKK YKKEKMKFGD SGSEWVYYKK IDALLSSSQV 240 QQGGLSCGIN SGEYVFMNPK VYLNRSNGLD EMRDSPGNSS KGEEDESEGL PPKKMLGTGK 300 IRSSAAPYKM LADSFEKFSE KYERIEDSKR QQMVELEKMR MDLHRDLEMQ KREILERGHA 360 EIAKIRQGED EDNAENISG

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MDDENDVPYR SNTYATNVQK FPVENACYPR DIGNSYGEDD DNTDDGEEDE EEKAVNGVDD  60
DDDDDDDDDD DDDGGNGVQR ISNNDYEYGD EDDNNDDENG DGDQQRHPKK RKLKNLISSY  120
EFAPRMPAPP PLAPPAAPKP SYGGRNPLTD WTEHETLVLL DAWGDRFLKH GRKSLRGEEW  180
QEVAEKVSLG SKIERTDTQC RNRLDTLKKK YKKEKMKFGD SGSEWVYYKK IDALLSSSQV  240
QQGGLSCGIN SGEYVFMNPK VYLNRSNGLD EMRDSPGNSS KGEEDESEGL PPKKMLGTGK  300
IRSSAAPYKM LADSFEKFSE KYERIEDSKR QQMVELEKMR MDLHRDLEMQ KREILERGHA  360
EIAKIRQGED EDNAENISG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	4e-59	Trihelix family protein