PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY79101.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 281aa MW: 31649.4 Da PI: 9.5415

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY79101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.9	4.3e-24	154	198	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep rCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e TEY79101.1 154 DPEPSRCRRTDGKKWRCSRDAIADHKYCERHVNRGRHRSRKPVEG 198 79****************************************986 PP
2	QLQ	58.1	2.7e-20	72	107	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT +Q+++L++Q+l+yKy+ an+P+P++Ll +i+k TEY79101.1 72 PFTTSQWMELEHQALIYKYITANVPIPSYLLNPIRK 107 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MQQKRRCDSA NARLLRRIPV SEELIGFVPF FLSSFLKHVF GDMVGSCFAV LVVWSWYECA 60 SMHVLRGPCP CPFTTSQWME LEHQALIYKY ITANVPIPSY LLNPIRKALE HSRFSCLSFL 120 RPNAREFFIL SFLSLVPKLT GFETVGWGGS AKTDPEPSRC RRTDGKKWRC SRDAIADHKY 180 CERHVNRGRH RSRKPVEGGP GNRCPMDKET RKTCLKDKQH AYSLLDPLER TELSMGLGVA 240 SEEGQRRNGW GGGPLGEALH ATGNSSGQCK ALNLIASTPF S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	1e-39	GRF family protein