PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY78056.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 418aa MW: 46268.9 Da PI: 8.161

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY78056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.4	6.7e-13	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +W+++E++++++a +++ + Wk+I + +g +t q++s+ qky TEY78056.1 66 RESWSEQEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 110 789***************77.*****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MVSVYRSPPP DQDFSHFRGF YMSGDPSKMP AADGGKGILL PMAPEVNAAD DANKKIRKPY 60 TITKSRESWS EQEHDKFLEA LQLFDRDWKK IEAFIGSKTV IQIRSHAQKY FLKVQKNGTS 120 EHVPPPRPKR KAAHPYPQKA SKNVVPRTAG PGQSSVAQVE TGYAVRRDPF SVPSNPISSS 180 PLSSWSYNVV PAGCLPNIAK DDVGLASVAN NYSSSSNDCT PRVWKSNEMD HEVKVKQCNT 240 TKDMPDFAQV YGFIGSVFDP TATDHLQRLR KMEPINVETV LMLMKNLCVN LATPEFEDHV 300 SVVFSIFVSE FSACVLKIWE DHFGTSFSLT LDMHTSTSES CSLHIKWQPK MSVLGVKSSL 360 HRVLEKHYLN LNLKSSLSSK IGGDVSTCCF MMVAIVAALD DGVVEALPCT VSMAMVLS

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MVSVYRSPPP DQDFSHFRGF YMSGDPSKMP AADGGKGILL PMAPEVNAAD DANKKIRKPY  60
TITKSRESWS EQEHDKFLEA LQLFDRDWKK IEAFIGSKTV IQIRSHAQKY FLKVQKNGTS  120
EHVPPPRPKR KAAHPYPQKA SKNVVPRTAG PGQSSVAQVE TGYAVRRDPF SVPSNPISSS  180
PLSSWSYNVV PAGCLPNIAK DDVGLASVAN NYSSSSNDCT PRVWKSNEMD HEVKVKQCNT  240
TKDMPDFAQV YGFIGSVFDP TATDHLQRLR KMEPINVETV LMLMKNLCVN LATPEFEDHV  300
SVVFSIFVSE FSACVLKIWE DHFGTSFSLT LDMHTSTSES CSLHIKWQPK MSVLGVKSSL  360
HRVLEKHYLN LNLKSSLSSK IGGDVSTCCF MMVAIVAALD DGVVEALPCT VSMAMVLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52660.2	3e-74	MYB_related family protein