PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY77925.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 405aa MW: 46378.5 Da PI: 7.1566

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY77925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.6e-05	147	170	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++++Lk+H r H TEY77925.1 147 YICSVCGRKCKTNMDLKKHFRQlH 170 89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MSIPINSLKP QLQSIAFPTR AITHKPITLK PPIPLRTKPY QWRPVKSCFS SQEIDMVKTK 60 DGVYAAKAKK VVILWDLDNK PPRGPPYEAA QALKSMAKKF GDVIDIAAYA NRHAFIHLPE 120 WVVQGRREER RLDALERRGL STPAEPYICS VCGRKCKTNM DLKKHFRQLH ERERQKKMNR 180 MRSLKGKKRR NFKERFIDGN EKYNEAARRL VTPKVGYGLA QELRRAGVYV KTVQDKPQAA 240 DWALKRQMMH SMSRGVDWIV LVSDDSDFSE MLRKAREANL GTVVVGDQDR ALGRHADVWV 300 QWNRVENGEI QESDLELRKR EWRECDDDGD ERGERFSVSD FGGDLASVEL GLDEIIGAMG 360 INGVRVSSFS EGEEEEDGDY DFDDEGDYLL DSDDEGFQDE NGVCL

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MSIPINSLKP QLQSIAFPTR AITHKPITLK PPIPLRTKPY QWRPVKSCFS SQEIDMVKTK  60
DGVYAAKAKK VVILWDLDNK PPRGPPYEAA QALKSMAKKF GDVIDIAAYA NRHAFIHLPE  120
WVVQGRREER RLDALERRGL STPAEPYICS VCGRKCKTNM DLKKHFRQLH ERERQKKMNR  180
MRSLKGKKRR NFKERFIDGN EKYNEAARRL VTPKVGYGLA QELRRAGVYV KTVQDKPQAA  240
DWALKRQMMH SMSRGVDWIV LVSDDSDFSE MLRKAREANL GTVVVGDQDR ALGRHADVWV  300
QWNRVENGEI QESDLELRKR EWRECDDDGD ERGERFSVSD FGGDLASVEL GLDEIIGAMG  360
INGVRVSSFS EGEEEEDGDY DFDDEGDYLL DSDDEGFQDE NGVCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	190	LKGKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-148	C2H2 family protein