 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY77050.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 257aa MW: 29253.7 Da PI: 6.4078 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 56.2 | 5.7e-18 | 60 | 113 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
TEY77050.1 60 KKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 113
4557899**********************************************9 PP
| |||||||
| 2 | HD-ZIP_I/II | 129.5 | 1.3e-41 | 59 | 149 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lkr+++alk++n+ L++++++L+++l
TEY77050.1 59 EKKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEALKADNDVLKSQNKKLQTQL 149
69**************************************************************************************987 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 257 aa Download sequence |
MAYVPADSMF RSHDDVPQDF HGVPDFLMRR SMSFSGMDRA EEFHADDEGS DDGSQLLGEK 60 KRRLNLEQVK ALEKSFELGN KLEPERKMQL ARALGLQPRQ IAIWFQNRRA RWKTKQLEKD 120 YDVLKRQFEA LKADNDVLKS QNKKLQTQLL GLKGGESAAG AINLNKDNEG SWSNGSDTSC 180 EVNIKTSTAT ESAMYNQRNK HGSMFPPPQT LTQLLHGSGR PEQHQSMPAA NECFGTMFAG 240 IEETQEFWPW SEQQNFH |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 108 | 116 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G69780.1 | 3e-69 | HD-ZIP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|