PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY76725.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 291aa MW: 32458.2 Da PI: 5.5

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY76725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	120.8	7.6e-38	44	142	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkCa+dC+lapyfp++++ +f n+h+lFG+sn++k+++ l++ e+++am++++++++ara+dPv G++++i++l++q++ +kael+ + + TEY76725.1 44 ACAACKYQRRKCASDCILAPYFPHDRQPQFLNAHRLFGVSNIVKIVAGLNQPEKDHAMRTIIFQSDARASDPVGGCYRIIRDLEHQISLAKAELEIVLH 142 7*********************************************************************************************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MQSPNHILHT TKTPIKNNKT LTPRPTNPAA APSQPRSHAS TTQACAACKY QRRKCASDCI 60 LAPYFPHDRQ PQFLNAHRLF GVSNIVKIVA GLNQPEKDHA MRTIIFQSDA RASDPVGGCY 120 RIIRDLEHQI SLAKAELEIV LHHLALCRAA AQQEGPPPED DDQGWREPYG TEEEVAAVED 180 LNSWGCMGVA HAHAESTSSS FPHDDHRHAR KCSLEECNDD MIRPIFDRLV CDDGRDDEFE 240 LDSDGNIIPR NITNSPEKAA IKEDDECFSY IQDHQDLKAA ATIFSLTNCD L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	1e-51	LBD family protein