PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY75785.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 925aa    MW: 102652 Da    PI: 6.3898
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY75785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-23170271199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d+++++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  TEY75785.1 170 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHNNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNDKNQL 264
                 99*****************************8544444..48************************************************..7888889 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  TEY75785.1 265 LLGIRRA 271
                 ****997 PP
2Auxin_resp110.31.9e-36296379183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+haa+t s ++++YnPras+seFv++++++ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sd+dpvrW nS+Wrs+k
  TEY75785.1 296 ASHAAATYSRYTIFYNPRASPSEFVIPLAEYIKAVHhTRVSVGMRFRMLFETEESSVRRYMGTITGISDSDPVRWLNSHWRSVK 379
                 689********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 925 aa     Download sequence    
MKLSACLNQQ SPEGKISLFF LFVCILLWFE ALLNSEIWHS VEKVDVEFHL FCAFLRGEKS  60
CLNSELWHAC AGPLVSLPSV GSHVVYFPQG HSEQVAVSTN KEADAQMPNY QSLPAQLICQ  120
LHNVTMHADI ETDEVYAQMT LQPLNAQEQK EISFHPADLG AASKQPTNYF CKTLTASDTS  180
THGGFSVPRR AAEKVFPPLD FSQQPPAQEL IARDLHNNEW KFRHIFRGQP KRHLLTTGWS  240
VFVSAKRLVA GDSVLFIWND KNQLLLGIRR ANRPQTVMPS SVLSSDSMHL GLLAAASHAA  300
ATYSRYTIFY NPRASPSEFV IPLAEYIKAV HHTRVSVGMR FRMLFETEES SVRRYMGTIT  360
GISDSDPVRW LNSHWRSVKV GWDESTAGER QPRVSLWEIE PLTTFPMYPS PFPLRLKRPW  420
PSGLPSYAGM KADEMGLNPS LMWLRGDGGM QCLNQGMGVT PWMQPRFDMS MLSMQNDIYQ  480
AMSAAAMQDI RVVDPSKQML SSVMQFQQPQ SVGSSSAGYM QQSHCSAPFA QSLQGQSQAM  540
SHANLLQRQL LQQNSFNDAQ IQHQHQQQHG NQTQHDIDPQ QTQLSSNSQL QSPTMHSMSS  600
MQQSFSESNS KPVGNMSSPL HSLLSSVTQD EASNLLNMSR SSNLLSSSGW PKKRVALDPL  660
SSGLSSQSIT PQAYQLGLSN AYTTSNPVTL PPFPGRECLM GQEANNDPHN NFLFGVNIDS  720
SSLLMPNGMP NLKAVVGDTD NAMAFASSSY MTNSGADYQL NPTVTSSSCI DDSGLLMSTE  780
NGGNNNPPHR TFVKVHKFGS FGRSLDITKF SSYPELRSEL AQMFGLEGEL EDPLRSGWQL  840
VFVDRENDVL LLGDDPWQEF VNSVWCIKIL SPQEVQEMGK PGQELLNSVP LQRLPVQNGG  900
CDGYGNRQEA RSMSTGIPSV GSLDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein