PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY75733.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 182aa    MW: 19799.8 Da    PI: 7.4066
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY75733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.59.9e-201058149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ie ks  qv f+kRr g++ KA ELSvLC+ e+a+++ s+ gkly +
  TEY75733.1 10 KKIEKKSCLQVAFTKRRGGLFRKATELSVLCGLEIAILVKSPAGKLYSF 58
                689********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MASCKKIPIK KIEKKSCLQV AFTKRRGGLF RKATELSVLC GLEIAILVKS PAGKLYSFGH  60
PSVDALINRA APSPAAKRIL PYGNDGGLQL HQLEQLPNSL EKKVEENPKN CGPPLSIHQQ  120
PSPSSNLISA DKFVMDAASP LSLQQLIAAD DIVIETDIFC DEEEAQLASS IDYQNYYHIL  180
GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-19M-type_MADS family protein