PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY75227.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family RAV
Protein Properties Length: 310aa    MW: 34766.1 Da    PI: 9.6631
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY75227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.36.8e-123987155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s++kGV   + +grW A+I++      ++r++lg+f  + eAa a++ a+++++g
  TEY75227.1 39 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEAEAACAYDTAAQRFRG 87
                689***9788.8*********3.....5**********99************998 PP
2B3103.61e-32160259195
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+ tpsdv+k++rlv+pk++ae+h     g+++ +++ l led +g++W+++++y+++s++yvltkGW++Fvk+++L++gD+v F+++  ++++l++
  TEY75227.1 160 FEKAVTPSDVGKLNRLVIPKQHAEKHfpfqnGNSSSKGVLLNLEDGNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKELRAGDVVSFERSTGQDKQLYI 258
                 89****************************98888899**************************************************87657766666 PP

                 E CS
          B3  95 k 95 
                  
  TEY75227.1 259 D 259
                 5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDGSSADESS TTNSLSMTLP SPPPPENGVE AESRKLPSSR FKGVVPQPNG RWGAQIYEKH  60
QRVWLGTFNE EAEAACAYDT AAQRFRGCDA VTNFKPDEDA AEAAFLASHS KAEIVDMLRK  120
HTYHDELAQS RRSFSCDGGG RISPSQNLFA SAAKARKQLF EKAVTPSDVG KLNRLVIPKQ  180
HAEKHFPFQN GNSSSKGVLL NLEDGNGKVW RFRYSYWNSS QSYVLTKGWS RFVKEKELRA  240
GDVVSFERST GQDKQLYIDW KVRGGSNRVQ MVRLFGVNIF ECGSGKRMRE REMEIMGLDC  300
AKKQRIINVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.11e-128RAV family protein