PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY74025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 683aa MW: 76336.1 Da PI: 9.4632 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 3e-05 | 251 | 273 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY74025.1 251 FVCEICSKGFQRDQNLQLHRRGH 273 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.6 | 0.00085 | 327 | 349 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TEY74025.1 327 WKCDKCSKKYAVQSDWKAHSKTC 349 58*****************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 683 aa Download sequence |
MNWEHPRSRS ALMNLHLRRS RNGDADVKNE YESQNVVIVV HRVKEVIVHF FTFFFYCVIL 60 PLSVLVPQVY VPKWGAIYLP SIITILNLVG TPRSFYWVLF ENVMSFHRTK ATVMGLVEAK 120 TAKEWVISKI PVLFPNHNVV KDLSPLPTSH VARLNFSLSQ DSLSSSSHSS QTAKRNMKIS 180 AIQEENISNL TTASNDASST GGEMYPPPYF PAPTAAPPPP AKKKRSQPGH PDPGSEVISL 240 SPRALMATNR FVCEICSKGF QRDQNLQLHR RGHNLPWKLK QRSSKDVRKK VYVCPETSCV 300 HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG TREYRCDCGT 360 LFSRRDSFIT HRAFCDALAE ESAKTITTPT PTTPTIPPQN AANSFSHHIN LQQIQSQFSN 420 AQQQLPFPIK KENQPFTLRP PWLPPPPNID LTTPSSIFQD FQENTQNPNP NTTPTTTSMG 480 PTTSLHHAFH HHHPPPHISA TALLQRAAEM GSKSSTTPTP TRPHHPHVPA GESPASGFGL 540 KLASRDHFIN GLPPFGNKAA ASSPFMLHHD MMMFNTSTFQ HHNQESTFED DDLSFAGMLN 600 NTNNNTSPSS HSKRVDESLD FDATLNQFSA SNGGNHDDRM TRDFLGLRPL SQSDILSFAG 660 LSNCINTTSC GEHQSQSQRS WQG |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 278 | 290 | KLKQRSSKDVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66730.1 | 3e-96 | C2H2 family protein |