PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY73988.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 394aa MW: 43821.4 Da PI: 6.9538

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY73988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.5	4.9e-08	299	339	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L TEY73988.1 299 ARQRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 339 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDSIDWGNEL EQSLIMSSPN LLYNNNNDDK IESSIHQKTE NILPQWNSIR SGAGSGWAVA 60 VNEGAMTSRS YIECGRPSAF NTTLPHPHPR VENGIIINNE SNILDAAASF ESSLDCLLSA 120 STATSADHDD IFSDCWNFAN PDKIVAKNSD EIGSNQKRKL EFRSDRGDFE PKKARFEKNP 180 SSSNINFHSD RGDFEPKKAR FEKSPTSSNI NFHSDRGDFE SKKARFERNS SSANINFQQA 240 SSSASSGGCD EPDTEAIAQM KEIIYRAAAF RPVDFGAEAA EKPRRKNVRV SSDPQTVAAR 300 QRRERISERI RVLQKLVPGG SKMDTASMLD EAANYLKFLR SQVKALEAMG QKNPVGNNFP 360 TSANFGFSPF IGYSFAMQQQ PQFSIHHNPN QFKS

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDSIDWGNEL EQSLIMSSPN LLYNNNNDDK IESSIHQKTE NILPQWNSIR SGAGSGWAVA  60
VNEGAMTSRS YIECGRPSAF NTTLPHPHPR VENGIIINNE SNILDAAASF ESSLDCLLSA  120
STATSADHDD IFSDCWNFAN PDKIVAKNSD EIGSNQKRKL EFRSDRGDFE PKKARFEKNP  180
SSSNINFHSD RGDFEPKKAR FEKSPTSSNI NFHSDRGDFE SKKARFERNS SSANINFQQA  240
SSSASSGGCD EPDTEAIAQM KEIIYRAAAF RPVDFGAEAA EKPRRKNVRV SSDPQTVAAR  300
QRRERISERI RVLQKLVPGG SKMDTASMLD EAANYLKFLR SQVKALEAMG QKNPVGNNFP  360
TSANFGFSPF IGYSFAMQQQ PQFSIHHNPN QFKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	287	EKPRRKN
2	282	287	KPRRKN
3	300	305	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	7e-45	bHLH family protein