PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY73727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 108aa MW: 12315.4 Da PI: 10.8524 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.6 | 1.4e-17 | 14 | 48 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+tt TplWR gp g+k+LCnaCG++y k+++ TEY73727.1 14 CTDCRTTRTPLWRGGPHGPKSLCNACGIKYNKRRR 48 *******************************9985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 108 aa Download sequence |
MDLKQQISEE KKICTDCRTT RTPLWRGGPH GPKSLCNACG IKYNKRRRER LGLDTGNRKK 60 KRSEDRSSKV GEILKMRFMR SSKLMSKLRE EEQAAILLMA LSCGSVSA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 45 | 62 | KRRRERLGLDTGNRKKKR |
2 | 46 | 63 | KRRRERLGLDTGNRKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49300.1 | 2e-26 | GATA family protein |