PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY72881.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 547aa    MW: 60619.3 Da    PI: 8.4816
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY72881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.54.5e-22161260197
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f k+lt sd++++g +++ +k+a+e+     +++++ +++l+ +d++g +W +k+i+r++++r++lt+GW+ Fv +++L +gD ++F   + +++el+v
  TEY72881.1 161 FSKILTASDTSTHGGFSVLRKHANEClppldMSQPTPTQDLVAKDLQGHEWHFKHIFRGQPRRHLLTTGWSTFVTSKKLVAGDCFIFV--RGENGELRV 257
                 889***************************9777777889************************************************..448999999 PP

                 EEE CS
          B3  95 kvf 97 
                 + +
  TEY72881.1 258 GTR 260
                 876 PP
2Auxin_resp88.61.2e-29287366183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+st++   v+Y+Pr+  ++Fv+ ++k+++a+k++++vGm f+m+fe+ed +err++Gt+vgv d+++ +W++S WrsLk
  TEY72881.1 287 ASHALSTHTLLAVYYKPRT--TQFVIGINKYLEAIKHEFAVGMHFQMRFEGEDLPERRFTGTIVGVGDCSS-QWTESAWRSLK 366
                 689***************6..9**********************************************887.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MFLLQAYTLT CFISLCVCSS LSLLQLSSFP PFFSMAHADG LIKGASEERG AASQALYGAL  60
WKACAGPLVD VPDVEDNVYY FPQGHLEQLE ASTNQELDQH IPHYNLPTKI LCRVAHIHMM  120
AEPDTDEVYA RINLLPHTDQ TKPRNPYAPP PDPPKPSIRS FSKILTASDT STHGGFSVLR  180
KHANECLPPL DMSQPTPTQD LVAKDLQGHE WHFKHIFRGQ PRRHLLTTGW STFVTSKKLV  240
AGDCFIFVRG ENGELRVGTR HLARRQSSMP PAVISSQSML LGVLASASHA LSTHTLLAVY  300
YKPRTTQFVI GINKYLEAIK HEFAVGMHFQ MRFEGEDLPE RRFTGTIVGV GDCSSQWTES  360
AWRSLKVQWD EPATIPRPDR VSPWEIEPFV PSPVETSQPA TKIKKQVLRP PKQKDLNGSL  420
PSSAPRSGRA LLSLLTVNTS LSLSRESRAG KSILLQSALC NSPIASRTRK CLDQIKKLEN  480
APACRLFGFD LRNNSNKISP LLEKEAHLPR PSTKSPETDD KQGVDLLASS KEGKDAQMEA  540
PPIDTQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.11e-172ARF family protein